PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D13G0732
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 437aa    MW: 48392.5 Da    PI: 6.9887
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D13G0732genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.57.8e-10151191545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le     L+   ++L
  Gh_D13G0732 151 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLRLTRLEQEL 191
                  788*************************8766666655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-8147218IPR004827Basic-leucine zipper domain
PfamPF077161.3E-6149193IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.381149193IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-6151194No hitNo description
CDDcd147081.37E-22151203No hitNo description
Gene3DG3DSA:1.20.5.1703.5E-7152196No hitNo description
PROSITE patternPS000360154169IPR004827Basic-leucine zipper domain
PfamPF141448.0E-29236309IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MQSFKAAAPH TTPDMFCHSS FFLRGDDDFN PANAFHHDDS VDLSSSSIFS LKSSNVDVVG  60
NSLHYDAFNT GIRAAEIVSS GTGCLDTGQF MYQKGTTLGN GHIENWGDSG LADNSQQTDT  120
STDVDTDDKN QLQHGAIITV DQSKLKTGDQ KTLRRLAQNR EAARKSRLRK KAYVQQLESS  180
RLRLTRLEQE LQKARQQGIF IASGLSGGHG LSVSGNAALA FDMDYAHWLN EHQRLINDLR  240
SGLNSHLGDS ELRILVESVM AHYDEVFKLK SIGVKADAFH MLSGMWKTPA ERCFMWLGGF  300
RSSELLKILG KHLEPLTDQQ LMGICNLQQS SQQAEDALSQ GMEALQQALV DTLSSACLGP  360
TACGNVADYM SQMAIAMSKL ATLENFLHQA DLLRHQTLQQ MHRILTTRQA ARALLVFSDY  420
NSRLRALSSL WLARPRN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012465526.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X5
SwissprotQ9SX271e-179PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLA0A0D2SAK10.0A0A0D2SAK1_G
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-144bZIP family protein